Fix js nodes not having filter applied.

The workaround for filter being overwritten by applying to late for
refreshComboInNodes was to apply the filter with beforeRegisterNodeDef,
but that doesn't apply no js nodes inverted the issue of nodes being
hidden. A setup call has been added to ensure js nodes have the default
filter applied

web/js/deprecate_nodes.js

@@ -41,6 +41,14 @@ const deprecate_nodes = {
     async init() {
         app.graph.filter = app.graph.filter || "shown"
     },
+    async setup() {
+        for (let k in LiteGraph.registered_node_types) {
+            let nodeType = LiteGraph.registered_node_types[k]
+            if (!nodeType.filter) {
+                nodeType.filter = app.graph.filter
+            }
+        }
+    },
     async getCustomWidgets() {
         return {
             ADEWARN(node, inputName, inputData) {